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Species belonging to selected taxon:
Helianthus tuberosus
ABOUT THIS RECORD
ID:
MNEST044833
species:
Helianthus tuberosus
source:
microPC, original name:
miR393
Taxonomy by NCBI:
Helianthus tuberosus
Helianthus
Heliantheae
Heliantheae alliance
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCAAAGGGATCGCATTGATCC
miRNA*
ATCATGCGATCTCTTCGGA
mismatches:
1
bulges:
1
View larger
pre-miRNA
TCCAAAGGGATCGCATTGATCC
ATCTGTCCACTCGGATTTCAATCTCAGTTGATAATTTGG
ATCATGCGATCTCTTCGGA
dot-bracket secondary structure
(((.((((((((((((.(((((
(..((((.(((.((((....)))).))).))))...)))
))))))))))))))).)))
SIMILARITIES
miRBase
zma-MIR393b
:
0.0000002
PMRD
zma-miR393f
:
0.0000002
microPC
miR393
:
4e-40
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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